Dhingra, N., Kuppa, S., Wei, L., Pokhrel, N., Baburyan, S., Meng, X., Antony, E., and Zhao, X. The Srs2 helicase dampens DNA damage checkpoint by recycling RPA from chromatin. In Press. PNAS.
https://www.pnas.org/content/118/8/e2020185118 |
Ahmad, F., Patterson, A., Deveryshetty, J., Mattice, J., Pokhrel, N., Bothner, B., and Antony, E. Hydrogen-deuterium exchange reveals a dynamic DNA binding map of Replication Protein A. In Press. Nucleic Acids Research.
https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkaa1288/6097544 |
Corless, E.I., Imran S.M.S., Watkins, M.B., Bacik, J.P., Mattice J., Patterson A., Danyal, L.C., Soffe, M., Kitelinger, R., Seefeldt L.C., Origanti, S., Bennett, B., Ando, A., and Antony, E. The flexible N-terminus of BchL autoinhibits activity through interaction with its [4Fe-4S] and relieved upon ATP binding. J. Biol. Chem. 2020. doi: 10.1074/jbc.RA120.016278. LINK.
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Corless, E.I., Bennet, B.B., and Antony, E. Substrate recognition induces sequential electron transfer across subunits in the nitrogenase-like DPOR complex. Journal of Biological Chemistry.
J Biol Chem. 2020 Sep 25;295(39):13630-13639. doi: 10.1074/jbc.RA120.015151. LINK. |
Pokhrel N., Caldwell, C.C., Corless, E.I., Tillison, E.A., Tibbs, J., Jocic, N., Ali Tabei, S.M., Wold, M.S., Spies, M. and Antony E. Dynamics and Selective Remodeling of the DNA Binding Domains of RPA. Nature Structural & Molecular Biology. 26, p129–136 (2019).
https://www.nature.com/articles/s41594-018-0181-y Featured as cover |
Yates LA, Aramayo RJ, Pokhrel N, Caldwell CC, Kaplan JA, Perera RL, Spies M, Antony E, and Zhang X. A structural and dynamic model for the assembly of Replication Protein A on single stranded DNA. Nature Communications. 2018. doi: 10.1038/s41467-018-07883-7
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Venkiteshwaran K., Pokhrel N., Hussein F., Antony E., and Mayer B.K. Phosphate removal and recovery using phosphate binding proteins. Water Research X. 2018. https://doi.org/10.1016/j.wroa.2018.09.003
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Seefeldt L., Hoffman B., Peters J., Raugei S., Antony E., and Dean D. Energy Transduction in Nitrogenase. Accounts of Chemical Research. 2018. doi: 10.1021/acs.accounts.8b00112
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Singh S.P., Kukshal V., De Bona P., Antony E., and Galletto R. The mitochondrial single-stranded DNA binding protein from S. cerevisiae, Rim1, does not form stable homo-tetramers and binds DNA as a dimer of dimers. Nucleic Acids Research. 2018. doi: 10.1093/nar/gky530
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Antony E., and Lohman T.M. Dynamics of E. coli single stranded DNA binding (SSB) protein-DNA complexes. Seminars in Cell and Developmental Biology. 2018. S1084-9521(17)30432-9. DOI: 10.1016/j.semcdb.2018.03.017
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Pokhrel N., Origanti S., Davenport E.P., Gandhi D., Kaniecki K., Mehl R., Greene E., Dockdendorff C., and Antony E. Monitoring Replication Protein A (RPA) dynamics through site-specific incorporation of non-canonical amino acids. Nucleic Acids Research. 2017. 45(16):9413-9426. DOI: https://doi.org/10.1093/nar/gkx598
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Danyal, K., Shaw, S., Page, T.P., Duval, S., Fielding, A.J., Horitani, M., Marts, A.R., Lukoyanov, L., Dean, D.R., Raugei, S., Hoffman, B.M., Seefeldt, L.C. and Antony E. Negative Cooperativity in the Nitrogenase Fe Protein Electron Delivery Cycle. PNAS. 2016. doi: 10.1073/pnas.1613089113
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Davenport E.P., Harris D.F., Origanti S., and Antony E. Rad51 nucleoprotein filament disassembly captured using fluorescent Plasmodium falciparum SSB as a reporter for single-stranded DNA. PLos One. 2016.
http://dx.doi.org/10.1371/journal.pone.0159242 |
Yang Z.Y., Lebbetter R., Shaw S., Pence N., Tokmina-Lukaszewska M., Eilers B., Guo Q., Pokhrel N., Cash V.L., Dean D.R., Antony E., Bothner B., Peters J.W., and Seefeldt L.C. Evidence that the Pi release event is the rate limiting step in the nitrogenase catalytic cycle. Biochemistry. 2016. 5:55(26):3625-3635.
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Duval S., Danyal K., Shaw S., Dean D.R., Hoffman B.M., Antony E*. and Seefeldt L.C.* Establishing the order of electron transfer and ATP hydrolysis in Nitrogenase . PNAS. 2013. 110:16414-16419 (*Co-Corresponding Authors).
Highlighted in Science USU Press Release |
Antony E., Kozlov A.J., Nguyen B., and Lohman T.M. Plasmodium falciparum SSB tetramer binds single-stranded DNA only in a fully wrapped mode. J. Mol. Biol. 2012. 420: 284-295. Featured as cover Antony E., Weiland E.A., Korolev S., and Lohman T.M. Plasmodium falciparum SSB tetramer wraps single-stranded DNA with similar topology but opposite polarity to E. coli SSB. J. Mol. Biol. 2012. 420: 269-283. |